skip to content

Publications

2020

  • Metz, J., Lampei, C., Bäumler, L., Bocherens, H., Dittberner, H., Henneberg, L., de Meaux, J. and Tielbörger, K. (2020), Rapid adaptive evolution to drought in a subset of plant traits in a large‐scale climate change experiment. Ecol Lett. doi:10.1111/ele.13596
  • He, F., Steige, K.A., Kovacova, V., Goebel, U., Bouzid, M., Keightley, P.D., Beyer, A. and de Meaux, J., 2020. Cis-regulatory evolution spotlights species differences in the adaptive potential of gene expression plasticity. bioRxiv.
  • Takou, M., Hämälä, T., Koch, E., Steige, K.A., Dittberner, H., Yant, L., Genete, M., Sunyaev, S., Castric, V., Vekemans, X., Savolainen, O. and de Meaux, J., 2020. Maintenance of adaptive dynamics and no detectable load in a range-edge out-crossing plant population. bioRxiv, p.709873.
  • Wieters, B., Steige, K., He, F., Koch, E., Ramos-Onsins, S., Gu, H.Y., Guo, Y., Sunyaev, S. and de Meaux, J., 2020. Polygenic adaptation of rosette growth variation in Arabidopsis thaliana populations. BioRxiv.

2019

  • Fustier, M. A., Martínez-Ainsworth, N. E., Aguirre-Liguori, J. A., Venon, A., Corti, H., Rousselet, A., Dumas, F., Dittberner, H., Camarena, M. G., Grimanelli, D., Ovaskainen, O., Falque, M., Moreau, L., de Meaux, J., Montes-Hernández, S., Eguiarte, L. E., Vigouroux, Y., Manicacci, D., & Tenaillon, M. I. (2019). Common gardens in teosintes reveal the establishment of a syndrome of adaptation to altitude. PLoS genetics15(12), e1008512. https://doi.org/10.1371/journal.pgen.1008512

  • Dittberner, H., Becker, C., Jiao, W.-B., Schneeberger, K., Hölzel, N., Tellier, A., & Meaux, J. de. (2019). Strengths and potential pitfalls of hay-transfer for ecological restoration revealed by RAD-seq analysis in floodplain Arabis species. Molecular Ecology, 0(0). https://doi.org/10.1111/mec.15194

2018

  • M Bouzid, F He, G Schmitz, R E Häusler, A P M Weber, T Mettler-Altmann, J De Meaux; Arabidopsisspecies deploy distinct strategies to cope with drought stress, Annals of Botany, , mcy237, https://doi.org/10.1093/aob/mcy237
  • Dittberner, H., Korte, A., Mettler‐Altmann, T., Weber, A. P. M., Monroe, G., & Meaux, J. de. (2018). Natural variation in stomata size contributes to the local adaptation of water-use efficiency in Arabidopsis thaliana. Molecular Ecology, 0(0). https://doi.org/10.1111/mec.14838
  • Glander, S., He, F., Schmitz, G., Witten, A., Telschow, A., & de Meaux, J. (2018). Assortment of Flowering Time and Immunity Alleles in Natural Arabidopsis thaliana Populations Suggests Immunity and Vegetative Lifespan Strategies Coevolve. GENOME BIOLOGY AND EVOLUTION, 10(9), 2278–2291. https://doi.org/10.1093/gbe/evy124
  • Goebel, U., Arce, A. L., He, F., Rico, A., Schmitz, G., & de Meaux, J. (2018). Robustness of Transposable Element Regulation but No Genomic Shock Observed in Interspecific Arabidopsis Hybrids. GENOME BIOLOGY AND EVOLUTION, 10(6), 1403–1415. https://doi.org/10.1093/gbe/evy095
  • Takou M, Wieters B, Kopriva S, Coupland G, Linstädter A, De Meaux J. (2018). Linking genes with ecological strategies in Arabidopsis thaliana. Journal of Experimental Botany. https://doi.org/10.1093/jxb/ery447

2017

  • Hu, J., Lei, L., & de Meaux, J. (2017). Temporal fitness fluctuations in experimental Arabidopsis thaliana populations. PLOS ONE, 12(6). https://doi.org/10.1371/journal.pone.0178990

2016

  • He, F., Arce, A. L., Schmitz, G., Koornneef, M., Novikova, P., Beyer, A., & de Meaux, J. (2016). The Footprint of Polygenic Adaptation on Stress-Responsive Cis-Regulatory Divergence in the Arabidopsis Genus. MOLECULAR BIOLOGY AND EVOLUTION, 33(8), 2088–2101. https://doi.org/10.1093/molbev/msw096

2014

  • Hu, J.-Y., Zhou, Y., He, F., Dong, X., Liu, L.-Y., Coupland, G., … de Meaux, J. (2014). miR824-Regulated AGAMOUS-LIKE16 Contributes to Flowering Time Repression in Arabidopsis. PLANT CELL, 26(5), 2024–2037. https://doi.org/10.1105/tpc.114.124685
  • Saez-Aguayo, S., Rondeau-Mouro, C., Macquet, A., Kronholm, I., Ralet, M.-C., Berger, A., … North, H. M. (2014). Local Evolution of Seed Flotation in Arabidopsis. PLOS GENETICS, 10(3). https://doi.org/10.1371/journal.pgen.1004221

2013

  • Debieu, M., Tang, C., Stich, B., Sikosek, T., Effgen, S., Josephs, E., … de Meaux, J. (2013). Co-Variation between Seed Dormancy, Growth Rate and Flowering Time Changes with Latitude in Arabidopsis thaliana. PLOS ONE, 8(5). https://doi.org/10.1371/journal.pone.0061075
  • Falke, K. C., Glander, S., He, F., Hu, J., de Meaux, J., & Schmitz, G. (2013). The spectrum of mutations controlling complex traits and the genetics of fitness in plants. CURRENT OPINION IN GENETICS & DEVELOPMENT, 23(6), 665–671. https://doi.org/10.1016/j.gde.2013.10.006
  • Klironomos, F. D., de Meaux, J., & Berg, J. (2013). Can we always sweep the details of RNA-processing under the carpet? PHYSICAL BIOLOGY, 10(5). https://doi.org/10.1088/1478-3975/10/5/056007

2012

  • He, F., Zhang, X., Hu, J., Turck, F., Dong, X., Goebel, U., … de Meaux, J. (2012). Genome-wide Analysis of Cis-regulatory Divergence between Species in the Arabidopsis Genus. MOLECULAR BIOLOGY AND EVOLUTION, 29(11), 3385–3395. https://doi.org/10.1093/molbev/mss146
  • Kronholm, I., Xavier Pico, F., Alonso-Blanco, C., Goudet, J., & de Meaux, J. (2012). GENETIC BASIS OF ADAPTATION IN ARABIDOPSIS THALIANA: LOCAL ADAPTATION AT THE SEED DORMANCY QTL DOG1. EVOLUTION, 66(7), 2287–2302. https://doi.org/10.1111/j.1558-5646.2012.01590.x
  • Vetter, M. M., Kronholm, I., He, F., Haeweker, H., Reymond, M., Bergelson, J., … de Meaux, J. (2012). Flagellin Perception Varies Quantitatively in Arabidopsis thaliana and Its Relatives. MOLECULAR BIOLOGY AND EVOLUTION, 29(6), 1655–1667. https://doi.org/10.1093/molbev/mss011

2011

  • Alcazar, R., Reymond, M., Schmitz, G., & de Meaux, J. (2011). Genetic and evolutionary perspectives on the interplay between plant immunity and development. CURRENT OPINION IN PLANT BIOLOGY, 14(4), 378–384. https://doi.org/10.1016/j.pbi.2011.04.001
  • Chiang, G. C. K., Bartsch, M., Barua, D., Nakabayashi, K., Debieu, M., Kronholm, I., … de Meaux, J. (2011). DOG1 expression is predicted by the seed-maturation environment and contributes to geographical variation in germination in Arabidopsis thaliana. MOLECULAR ECOLOGY, 20(16), 3336–3349. https://doi.org/10.1111/j.1365-294X.2011.05181.x

2010

  • Alcazar, R., Garcia, A. V., Kronholm, I., de Meaux, J., Koornneef, M., Parker, J. E., & Reymond, M. (2010). Natural variation at Strubbelig Receptor Kinase 3 drives immune-triggered incompatibilities between Arabidopsis thaliana accessions. NATURE GENETICS, 42(12), 1135+. https://doi.org/10.1038/ng.704
  • Atwell, S., Huang, Y. S., Vilhjalmsson, B. J., Willems, G., Horton, M., Li, Y., … Nordborg, M. (2010). Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. NATURE, 465(7298), 627–631. https://doi.org/10.1038/nature08800
  • Chen, W.-H., de Meaux, J., & Lercher, M. J. (2010). Co-expression of neighbouring genes in Arabidopsis: separating chromatin effects from direct interactions. BMC GENOMICS, 11. https://doi.org/10.1186/1471-2164-11-178
  • He, F., Chen, W.-H., Collins, S., Acquisti, C., Goebel, U., Ramos-Onsins, S., … de Meaux, J. (2010). Assessing the Influence of Adjacent Gene Orientation on the Evolution of Gene Upstream Regions in Arabidopsis thaliana. GENETICS, 185(2), 695–701. https://doi.org/10.1534/genetics.110.114629
  • Kronholm, I., Loudet, O., & de Meaux, J. (2010). Influence of mutation rate on estimators of genetic differentiation - lessons from Arabidopsis thaliana (vol 11, pg 33, 2010). BMC GENETICS, 11. https://doi.org/10.1186/1471-2156-11-88
  • Piazza, P., Bailey, C. D., Cartolano, M., Krieger, J., Cao, J., Ossowski, S., … Tsiantis, M. (2010). Arabidopsis thaliana Leaf Form Evolved via Loss of KNOX Expression in Leaves in Association with a Selective Sweep. CURRENT BIOLOGY, 20(24), 2223–2228. https://doi.org/10.1016/j.cub.2010.11.037

2009

  • Collins, S., & de Meaux, J. (2009). ADAPTATION TO DIFFERENT RATES OF ENVIRONMENTAL CHANGE IN CHLAMYDOMONAS. EVOLUTION, 63(11), 2952–2965. https://doi.org/10.1111/j.1558-5646.2009.00770.x

2008

  • de Meaux, Juliette, Hu, J.-Y., Tartler, U., & Goebel, U. (2008). Structurally different alleles of the ath-MIR824 microRNA precursor are maintained at high frequency in Arabidopsis thaliana. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 105(26), 8994–8999. https://doi.org/10.1073/pnas.0803218105
  • de Meaux, Juliette, & Koornneef, M. (2008). The cause and consequences of natural variation: the genome era takes off! CURRENT OPINION IN PLANT BIOLOGY, 11(2), 99–102. https://doi.org/10.1016/j.pbi.2008.02.006

2007

  • Collins, S., de Meaux, J., & Acquisti, C. (2007). Adaptive walks toward a moving optimum. GENETICS, 176(2), 1089–1099. https://doi.org/10.1534/genetics.107.072926

2006

  • de Meaux, J. (2006). An adaptive path through jungle DNA. NATURE GENETICS, 38(5), 506–507. https://doi.org/10.1038/ng0506-506
  • de Meaux, Juliette, Pop, A., & Mitchell-Olds, T. (2006). Cis-regulatory evolution of chalcone-synthase expression in the genus arabidopsis. GENETICS, 174(4), 2181–2202. https://doi.org/10.1534/genetics.106.064543


2005

  • de Meaux, J, Goebel, U., Pop, A., & Mitchell-Olds, T. (2005). Allele-specific assay reveals functional variation in the chalcone synthase promoter of Arabidiopsis thaliana that is compatible with neutral evolution. PLANT CELL, 17(3), 676–690. https://doi.org/10.1105/tpc.104.027839

2003

  • De Meaux, J., Cattan-Toupance, I., Lavigne, C., Langin, T., & Neema, C. (2003). Polymorphism of a complex resistance gene candidate family in wild populations of common bean (Phaseolus vulgaris) in Argentina: comparison with phenotypic resistance polymorphism. MOLECULAR ECOLOGY, 12(1), 263–273. https://doi.org/10.1046/j.1365-294X.2003.01718.x
  • de Meaux, J, & Neema, C. (2003). Spatial patterns of diversity at the putative recognition domain of resistance gene candidates in wild bean populations. JOURNAL OF MOLECULAR EVOLUTION, 57(1), S90–S102. https://doi.org/10.1007/s00239-003-0011-6
  • de Meaux, J, & Mitchell-Olds, T. (2003). Evolution of plant resistance at the molecular level: ecological context of species interactions. HEREDITY, 91(4), 345–352. https://doi.org/10.1038/sj.hdy.6800342

2001

  • Neema, C., Lavigne, C., de Meaux, J., Cattan-Toupance, I., de Oliveira, J., Deville, A., & Langin, T. (2001). Spatial pattern for resistance to a pathogen. Theoretical approach and empirical approach at the phenotypic and molecular levels. GENETICS SELECTION EVOLUTION, 33(1), S3–S23.